BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017E02LP1|AL427166
(898 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1467 1744 0.0
>3x_Contig1467
Length = 7717
Score = 1744 bits (878), Expect = 0.0
Identities = 895/900 (99%), Gaps = 2/900 (0%)
Strand = Plus / Minus
Query: 1 atccaatcagggaaataatggtacctcaattggaaattgacaacaactctgctgtaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1494 atccaatcagggaaataatggtacctcaattggaaattgacaacaactctgctgtaaata 1435
Query: 61 agttcgataactgccaacatttgatggtagaatacccaagcaatgagtattccgaggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1434 agttcgataactgccaacatttgatggtagaatacccaagcaatgagtattccgaggaat 1375
Query: 121 ggcaagaattagtgaaatatatccgctggaaggaagttagactatggtgcgaaagcgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1374 ggcaagaattagtgaaatatatccgctggaaggaagttagactatggtgcgaaagcgaat 1315
Query: 181 tcaacagcgagtcatatgtatacgtagattcctcaatgaccagcatggaagaagccaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1314 tcaacagcgagtcatatgtatacgtagattcctcaatgaccagcatggaagaagccaaca 1255
Query: 241 tgcttcagaaaagggttggtgatgttagacacaatatgatattggcaccaacagatgaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1254 tgcttcagaaaagggttggtgatgttagacacaatatgatattggcaccaacagatgaga 1195
Query: 301 tcacgtttcgatatactccaattcgattcaaggaccctgaatcgatgaggcccgaattca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1194 tcacgtttcgatatactccaattcgattcaaggaccctgaatcgatgaggcccgaattca 1135
Query: 361 agatgcaagactttctcgataaatcgtggtatctaatgcaagtgatactaataaaatatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1134 agatgcaagactttctcgataaatcgtggtatctaatgcaagtgatactaataaaatatc 1075
Query: 421 attactcaaatttgaaatcattattcggagaactacaattcagttacttgaacagcatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 attactcaaatttgaaatcattattcggagaactacaattcagttacttgaacagcatat 1015
Query: 481 tgttcgccaactatggatccagtttacaatggcataacataattgaactagtctgcttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 tgttcgccaactatggatccagtttacaatggcataacataattgaactagtctgcttca 955
Query: 541 gcgattgccttacagaaggaaagtataaagagattatggaacaattggatagtttgttat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 gcgattgccttacagaaggaaagtataaagagattatggaacaattggatagtttgttat 895
Query: 601 gcacgcagatgaagagaataccggaagaatatcgagaatttctcatcaacatagaacttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 gcacgcagatgaagagaataccggaagaatatcgagaatttctcatcaacatagaacttt 835
Query: 661 tgcaaaaatgtgtyaggcgcagtaaagtgccattaccatcttggaagacgttaatccagg 720
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 tgcaaaaatgtgtcaggcgcagtaaagtgccattaccatcttggaagacgttaatccagg 775
Query: 721 aacaattcctcaatgagacgtatattgaagaagaagatcaagaccacgaaggtagctaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 aacaattcctcaatgagacgtatattgaagaagaagatcaagaccacgaaggtagctaca 715
Query: 781 acgaagatgacaacgaagacgaaaacgaatatkcaccagcgata-catcccaggtggtat 839
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 714 acgaagatgacaacgaagacgaaaacgaatatgcaccagcgatagcatcccaggtggtat 655
Query: 840 acactagcagataacaaccacaagggaaaaa-caatcacgtkacagctacttacgaatct 898
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 654 acactagcagataacaaccacaagggaaaaaccaatcacgtgacagctacttacgaatct 595
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7381
Number of Sequences: 1807
Number of extensions: 7381
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 898
length of database: 10,358,551
effective HSP length: 16
effective length of query: 882
effective length of database: 10,329,639
effective search space: 9110741598
effective search space used: 9110741598
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)